Received: from localhost ([::1]:51362 helo=stodi.digitalkingdom.org) by stodi.digitalkingdom.org with esmtp (Exim 4.76) (envelope-from ) id 1Tx6xr-0008W0-KC; Sun, 20 Jan 2013 18:18:24 -0800 Received: from mail-vc0-f175.google.com ([209.85.220.175]:59066) by stodi.digitalkingdom.org with esmtps (TLSv1:RC4-SHA:128) (Exim 4.76) (envelope-from ) id 1Tx6xa-0008VO-Lj for jbovlaste@lojban.org; Sun, 20 Jan 2013 18:18:14 -0800 Received: by mail-vc0-f175.google.com with SMTP id fw7so2581018vcb.20 for ; Sun, 20 Jan 2013 18:17:58 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:x-received:in-reply-to:references:date:message-id :subject:from:to:content-type; bh=Gq0Spv4PjNiVp6dvVvLUteO9d8KWn+A1kpT64tbnp3o=; b=d8etQmqeHkXSlHkfAHanSnBZ+qdr8uOS7i1btbXtyKjrMWJC9FUoyZG1bIqqEvxwBh 4s/tZdW5b1/RGIBiifuH/36goZEmAKEdOR2QGpgksEWrVn3AQR34f5NbDBO0wZOR6Nr2 PZtD7QREXTCHS3i2XT5ZmZiQRTnJ5Ojt8E127u7OBcfhLYV7Fga/YFqTwVNEreo95On4 R8paIx87UbwkMdfjnd4/uwMK+v05TnwzspFYMpo0295OxBO4P14ClJ8WynYRAVRtY/qQ f3R7Nh/0f+jBZQh3NLYV82gXO61ykfqHYUKX3NnazK+He5STQsxOk2KeETRtJ0uJ/y4R twAg== MIME-Version: 1.0 X-Received: by 10.52.99.106 with SMTP id ep10mr16145373vdb.53.1358734678050; Sun, 20 Jan 2013 18:17:58 -0800 (PST) Received: by 10.58.246.72 with HTTP; Sun, 20 Jan 2013 18:17:57 -0800 (PST) In-Reply-To: <3185684.p7HcNfvyA7@caracal> References: <3185684.p7HcNfvyA7@caracal> Date: Sun, 20 Jan 2013 21:17:57 -0500 Message-ID: From: Austin Thomas To: jbovlaste@lojban.org X-Spam-Score: 0.2 (/) X-Spam_score: 0.2 X-Spam_score_int: 2 X-Spam_bar: / X-Spam-Report: Spam detection software, running on the system "stodi.digitalkingdom.org", has identified this incoming email as possible spam. The original message has been attached to this so you can view it (if it isn't spam) or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: "Also, one can talk of an allele of a SNP that isn't part of a gene." My understanding of the terminology is that the SNP isn't what is being referred to as an allele (Not sure how one might define it in a non-protein coding 'intergenic' region). A single SNP can define a new allele though. [...] Content analysis details: (0.2 points, 5.0 required) pts rule name description ---- ---------------------- -------------------------------------------------- 0.0 FREEMAIL_FROM Sender email is commonly abused enduser mail provider (amt2839[at]gmail.com) -0.0 SPF_PASS SPF: sender matches SPF record 0.2 FREEMAIL_ENVFROM_END_DIGIT Envelope-from freemail username ends in digit (amt2839[at]gmail.com) 0.0 HTML_MESSAGE BODY: HTML included in message -0.1 DKIM_VALID_AU Message has a valid DKIM or DK signature from author's domain 0.1 DKIM_SIGNED Message has a DKIM or DK signature, not necessarily valid -0.1 DKIM_VALID Message has at least one valid DKIM or DK signature Subject: Re: [jbovlaste] SNP, RFLP, allele X-BeenThere: jbovlaste@lojban.org X-Mailman-Version: 2.1.14 Precedence: list Reply-To: jbovlaste@lojban.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Content-Type: multipart/mixed; boundary="===============4017998976807856493==" Errors-To: jbovlaste-bounces@lojban.org --===============4017998976807856493== Content-Type: multipart/alternative; boundary=20cf307f30f8d447e404d3c311b3 --20cf307f30f8d447e404d3c311b3 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable "Also, one can talk of an allele of a SNP that isn't part of a gene." My understanding of the terminology is that the SNP isn't what is being referred to as an allele (Not sure how one might define it in a non-protein coding 'intergenic' region). A single SNP can define a new allele though. What exactly are you trying to describe with ginbi'iclavricystu? Allele; non-coding region; or intergenic region? RexScientiarum On Sun, Jan 20, 2013 at 7:44 PM, Pierre Abbat wrote: > ginlerpavmeivricystu > ginbi'iclavricystu > Comments? > > I'm not sure what word to use for "allele". I used "tairmupli" on IRC the > other day; that means "x1 is the x2 form of x3", such as "=ABsang=BB is t= he > past > tense form of =ABsing=BB". I think an allele could be a mupli, but I'm no= t sure > what property it shows; sometimes an allele makes no difference to the > protein > produced. Also, one can talk of an allele of a SNP that isn't part of a > gene. > > Pierre > -- > ve ka'a ro klaji la .romas. se jmaji > > > _______________________________________________ > jbovlaste mailing list > jbovlaste@lojban.org > http://mail.lojban.org/mailman/listinfo/jbovlaste > --20cf307f30f8d447e404d3c311b3 Content-Type: text/html; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable "Also, one can talk of an allele of a SNP that isn't part of a gen= e." =A0My understanding of the terminology is that the SNP isn't w= hat is being=A0referred=A0to as an allele (Not sure how one might define it= in a non-protein coding 'intergenic' region). =A0A single SNP can = define a new allele though.=A0

What=A0exactly=A0are you trying to describe with=A0ginbi'= ;iclavricystu? =A0Allele; non-coding region; or intergenic region?

RexScientiarum

On Sun, J= an 20, 2013 at 7:44 PM, Pierre Abbat <phma@bezitopo.org> wro= te:
ginlerpavmeivricystu
ginbi'iclavricystu
Comments?

I'm not sure what word to use for "allele". I used "tair= mupli" on IRC the
other day; that means "x1 is the x2 form of x3", such as "= =ABsang=BB is the past
tense form of =ABsing=BB". I think an allele could be a mupli, but I&#= 39;m not sure
what property it shows; sometimes an allele makes no difference to the prot= ein
produced. Also, one can talk of an allele of a SNP that isn't part of a= gene.

Pierre
--
ve ka'a ro klaji la .romas. se jmaji


_______________________________________________
jbovlaste mailing list
jbovlaste@lojban.org
http://mail.lojban.org/mailman/listinfo/jbovlaste

--20cf307f30f8d447e404d3c311b3-- --===============4017998976807856493== Content-Type: text/plain; charset="us-ascii" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Content-Disposition: inline _______________________________________________ jbovlaste mailing list jbovlaste@lojban.org http://mail.lojban.org/mailman/listinfo/jbovlaste --===============4017998976807856493==--